Index

A

ACC (common.constants.mercure_info attribute) acc (common.types.TaskInfo attribute) accept_compressed_images (common.types.Config attribute) access_key_id (common.types.S3Target attribute) access_token (common.types.DicomWebTarget attribute) ACTION (common.constants.mercure_info attribute) (common.constants.mercure_rule attribute) action (common.types.Rule attribute) (common.types.TaskInfo attribute) ACTION_TRIGGER (common.constants.mercure_rule attribute) action_trigger (common.types.Rule attribute) add_dispatching() (in module routing.generate_taskfile) add_info() (in module routing.generate_taskfile) add_module() (in module webinterface.modules) add_new_user() (in module webinterface.users) add_processing() (in module routing.generate_taskfile)

add_rule() (in module webinterface.rules) add_study() (in module routing.generate_taskfile) add_target() (in module webinterface.targets) additional_tags (common.types.DicomReceiverConfig attribute) additional_volumes (common.types.Module attribute) aet_source (common.types.DicomTarget attribute) (common.types.DicomTLSTarget attribute) aet_target (common.types.DicomTarget attribute) (common.types.DicomTLSTarget attribute) appliance_name (common.types.Config attribute) applied_rule (common.types.TaskInfo attribute) async_post() (in module common.monitor) async_run() (in module webinterface.common) async_run_exec() (in module webinterface.common) async_send_task_event() (in module common.monitor) AsyncTimer (class in common.helper) authenticate() (webgui.SessionAuthBackend method)

B

BadRequestResponse (class in webinterface.modules) bookkeeper module

bookkeeper (common.types.Config attribute) bookkeeper_api_key (common.types.Config attribute) BOTH (common.constants.mercure_actions attribute) bucket (common.types.S3Target attribute)

C

ca_cert (common.types.DicomTLSTarget attribute) change_password (webinterface.users.User attribute) check_folders() (in module common.config) check_study_series() (in module routing.route_studies) check_study_timeout() (in module routing.route_studies) clean() (in module cleaner) clean_dir() (in module cleaner) cleaner module cleaner_scan_interval (common.types.Config attribute) comment (common.types.Module attribute) (common.types.Rule attribute) (common.types.Target attribute) common.config module common.constants module common.helper module common.monitor module common.notification module common.rule_evaluation module common.tagslist module

common.types module Compat (class in common.types) COMPLETE_FORCE (common.constants.mercure_study attribute) complete_force (common.types.TaskStudy attribute) COMPLETE_REQUIRED_SERIES (common.constants.mercure_study attribute) complete_required_series (common.types.TaskStudy attribute) COMPLETE_TRIGGER (common.constants.mercure_study attribute) complete_trigger (common.types.TaskStudy attribute) COMPLETED (common.constants.mercure_events attribute) compose_task() (in module routing.generate_taskfile) Config (class in common.types) configuration() (in module webgui) configuration_edit() (in module webgui) configuration_edit_post() (in module webgui) configure() (in module common.monitor) constraints (common.types.Module attribute) contact (common.types.Module attribute) (common.types.Rule attribute) (common.types.Target attribute) control_services() (in module webgui) create_arg_parser() (in module dispatch.process_dcmsend_result) create_database() (in module bookkeeper) create_series_task() (in module routing.generate_taskfile) create_study_task() (in module routing.generate_taskfile) create_users() (in module webinterface.users) CREATION_TIME (common.constants.mercure_study attribute) creation_time (common.types.TaskStudy attribute)

D

DCM (common.constants.mercure_names attribute) DCMFILTER (common.constants.mercure_names attribute) delete_folder() (in module cleaner) delete_module() (in module webinterface.modules) delete_old_tests() (in module webgui) device_serial_number (common.types.TaskInfo attribute) dicom_receiver (common.types.Config attribute) DicomReceiverConfig (class in common.types) DicomTarget (class in common.types) DicomTLSTarget (class in common.types) DicomWebTarget (class in common.types) DISABLED (common.constants.mercure_rule attribute) disabled (common.types.Rule attribute) DISCARD (common.constants.mercure_actions attribute) (common.constants.mercure_folders attribute) discard_folder (common.types.Config attribute) discard_logs (common.types.ProcessingLogsConfig attribute) DISPATCH (common.constants.mercure_sections attribute)

dispatch (common.types.Task attribute) dispatch() (in module dispatcher) dispatch.process_dcmsend_result module dispatch.retry module dispatch.send module dispatch.status module dispatcher module dispatcher_scan_interval (common.types.Config attribute) do_post() (in module common.monitor) docker_arguments (common.types.Module attribute) docker_runtime() (in module process.process_series) docker_tag (common.types.Module attribute) DummyTarget (class in common.types)

E

edit_module() (in module webinterface.modules) edit_module_POST() (in module webinterface.modules) email (webinterface.users.User attribute) email_notification_from (common.types.Config attribute) emergency_clean_percentage (common.types.Config attribute) emergency_response() (in module webgui) EmptyDict (class in common.types) environment (common.types.Module attribute) ERROR (common.constants.mercure_events attribute) (common.constants.mercure_folders attribute) (common.constants.mercure_names attribute)

error() (in module webgui) error_folder (common.types.Config attribute) eval_rule() (in module common.rule_evaluation) evaluate_password() (in module webinterface.users) exit_cleaner() (in module cleaner) exit_dispatcher() (in module dispatcher) exit_processor() (in module processor) exit_router() (in module router) ExtendedUser (class in webgui) extra (common.types.Task.Config attribute)

F

FALLBACK (common.constants.mercure_rule attribute) fallback (common.types.Rule attribute) FALSE (common.constants.mercure_options attribute) features (common.types.Config attribute) FileLock (class in common.helper) FILES (common.constants.mercure_sections attribute) find_series_uid() (in module cleaner)

find_tasks() (in module common.monitor) folder (common.types.FolderTarget attribute) (common.types.RsyncTarget attribute) (common.types.SftpTarget attribute) FolderTarget (class in common.types) FORCE_COMPLETE (common.constants.mercure_names attribute) force_study_complete() (in module webinterface.queue) free() (common.helper.FileLock method)

G

g_log() (in module common.helper) get() (common.types.Compat method) (in module common.monitor) get_jobinfo() (in module webinterface.queue) get_name() (common.types.Target class method) get_nomad_logs() (in module webgui) get_runner() (in module common.helper) get_series() (in module common.monitor) get_task_custom_notification() (in module common.notification)

get_task_events() (in module common.monitor) get_task_info() (in module common.monitor) get_task_requested_notification() (in module common.notification) get_tasks() (in module common.monitor) get_tests() (in module common.monitor) get_triggered_rules() (in module routing.route_series) get_user_information() (in module webinterface.common) graphite_ip (common.types.Config attribute) graphite_port (common.types.Config attribute)

H

HALT (common.constants.mercure_names attribute) handle_processor_output() (in module process.process_series) hash_password() (in module webinterface.users) homepage() (in module webgui)

host (common.types.RsyncTarget attribute) (common.types.SftpTarget attribute) (common.types.XnatTarget attribute) http_password (common.types.DicomWebTarget attribute) http_user (common.types.DicomWebTarget attribute)

I

id (common.types.Task attribute) INCOMING (common.constants.mercure_folders attribute) incoming_folder (common.types.Config attribute) increase_retry() (in module dispatch.retry) influxdb_bucket (common.types.Config attribute) influxdb_host (common.types.Config attribute) influxdb_org (common.types.Config attribute) influxdb_token (common.types.Config attribute) INFO (common.constants.mercure_sections attribute) info (common.types.Task attribute) INVALID (common.constants.mercure_options attribute)

ip (common.types.DicomTarget attribute) (common.types.DicomTLSTarget attribute) is_admin (webgui.ExtendedUser property) (webinterface.users.User attribute) is_admin() (in module webinterface.users) is_ready_for_processing() (in module process.status) is_ready_for_sending() (in module dispatch.status) is_study_complete() (in module routing.route_studies) is_study_locked() (in module routing.route_studies) is_target_json_valid() (in module dispatch.status) is_terminated() (in module common.helper)

J

JOURNAL (common.constants.mercure_sections attribute)

L

LAST_RECEIVE_TIME (common.constants.mercure_study attribute) last_receive_time (common.types.TaskStudy attribute) launch_emergency_app() (in module webgui) LOCK (common.constants.mercure_names attribute)

lockCreated (common.helper.FileLock attribute) login() (in module webgui) login_post() (in module webgui) logout() (in module webgui) logs_file_store (common.types.ProcessingLogsConfig attribute)

M

main() (in module bookkeeper) (in module cleaner) (in module dispatcher) (in module processor) (in module router) (in module webgui) mercure (in module common.config) mercure_actions (class in common.constants) MERCURE_APPLIANCE (common.constants.mercure_info attribute) mercure_appliance (common.types.TaskInfo attribute) mercure_config (class in common.constants) mercure_defs (class in common.constants) mercure_events (class in common.constants) mercure_folders (class in common.constants) mercure_info (class in common.constants) mercure_names (class in common.constants) mercure_options (class in common.constants) mercure_rule (class in common.constants) mercure_sections (class in common.constants) MERCURE_SERVER (common.constants.mercure_info attribute) mercure_server (common.types.TaskInfo attribute) mercure_study (class in common.constants) MERCURE_VERSION (common.constants.mercure_info attribute) mercure_version (common.types.TaskInfo attribute) MISSING (common.constants.mercure_options attribute) module bookkeeper cleaner common.config common.constants common.helper common.monitor common.notification common.rule_evaluation common.tagslist common.types dispatch.process_dcmsend_result dispatch.retry dispatch.send dispatch.status dispatcher process.process_series process.status processor router routing.generate_taskfile routing.route_series routing.route_studies webgui webinterface.common webinterface.modules webinterface.queue webinterface.rules webinterface.services webinterface.targets webinterface.users

Module (class in common.types) module_config (common.types.TaskProcessing attribute) module_name (common.types.TaskProcessing attribute) MODULES (common.constants.mercure_config attribute) modules (common.types.Config attribute) MonitorHTTPError move_out_folder() (in module process.process_series) move_results() (in module process.process_series) move_study_folder() (in module routing.route_studies) MRN (common.constants.mercure_info attribute) mrn (common.types.TaskInfo attribute)

N

needs_change_password() (in module webinterface.users) next_retry_at (common.types.TaskDispatch attribute) nomad_info (common.types.Task attribute) nomad_runtime() (in module process.process_series) NORMAL (common.constants.mercure_options attribute) not_found() (in module webgui) NOTIFICATION (common.constants.mercure_actions attribute) (common.constants.mercure_sections attribute) notification_email (common.types.Rule attribute) notification_email_body (common.types.Rule attribute) notification_email_type (common.types.Rule attribute)

NOTIFICATION_PAYLOAD (common.constants.mercure_rule attribute) notification_payload (common.types.Rule attribute) notification_payload_body (common.types.Rule attribute) NOTIFICATION_TRIGGER_COMPLETION (common.constants.mercure_rule attribute) notification_trigger_completion (common.types.Rule attribute) notification_trigger_completion_on_request (common.types.Rule attribute) NOTIFICATION_TRIGGER_ERROR (common.constants.mercure_rule attribute) notification_trigger_error (common.types.Rule attribute) NOTIFICATION_TRIGGER_RECEPTION (common.constants.mercure_rule attribute) notification_trigger_reception (common.types.Rule attribute) NOTIFICATION_WEBHOOK (common.constants.mercure_rule attribute) notification_webhook (common.types.Rule attribute)

O

OFFPEAK (common.constants.mercure_options attribute) offpeak_end (common.types.Config attribute) offpeak_start (common.types.Config attribute)

OUTGOING (common.constants.mercure_folders attribute) outgoing_folder (common.types.Config attribute) output (common.types.TaskProcessing attribute)

P

parse() (in module dispatch.process_dcmsend_result) parse_and_submit_tags() (in module bookkeeper) parse_completion_series() (in module common.rule_evaluation) parse_payload() (in module common.notification) parse_rule() (in module common.rule_evaluation) password (common.types.RsyncTarget attribute) (common.types.SftpTarget attribute) (common.types.XnatTarget attribute) (webinterface.users.User attribute) patient_name (common.types.TaskInfo attribute) permissions (webinterface.users.User attribute) port (common.types.Config attribute) (common.types.DicomTarget attribute) (common.types.DicomTLSTarget attribute) post() (in module common.monitor) (in module common.notification) post_mercure_event() (in module bookkeeper) post_task_event() (in module bookkeeper) post_webgui_event() (in module bookkeeper) prefix (common.types.S3Target attribute) PRIORITY (common.constants.mercure_rule attribute) priority (common.types.Rule attribute) PROCESS (common.constants.mercure_actions attribute) (common.constants.mercure_sections attribute) process (common.types.Task attribute) process.process_series module process.status module

process_runner (common.types.Config attribute) PROCESSING (common.constants.mercure_folders attribute) (common.constants.mercure_names attribute) processing_folder (common.types.Config attribute) processing_logs (common.types.Config attribute) PROCESSING_MODULE (common.constants.mercure_rule attribute) processing_module (common.types.Rule attribute) processing_retain_images (common.types.Rule attribute) processing_runtime (common.types.Config attribute) processing_settings (common.types.Rule attribute) ProcessingLogsConfig (class in common.types) processor module processor_logs() (in module bookkeeper) project_id (common.types.XnatTarget attribute) push_files() (in module routing.route_series) push_input_images() (in module process.process_series) push_input_task() (in module process.process_series) push_series_complete() (in module routing.route_series) push_series_serieslevel() (in module routing.route_series) push_series_studylevel() (in module routing.route_series) push_serieslevel_notification() (in module routing.route_series) push_serieslevel_outgoing() (in module routing.route_series) push_serieslevel_processing() (in module routing.route_series) push_serieslevel_routing() (in module routing.route_series) push_studylevel_dispatch() (in module routing.route_studies) push_studylevel_error() (in module routing.route_studies) push_studylevel_notification() (in module routing.route_studies) push_studylevel_processing() (in module routing.route_studies)

Q

qido_url_prefix (common.types.DicomWebTarget attribute)

R

read_config() (in module common.config) read_services() (in module webinterface.services) read_tagslist() (in module common.config) read_users() (in module webinterface.users) RECEIVED (common.constants.mercure_events attribute) RECEIVED_SERIES (common.constants.mercure_study attribute) received_series (common.types.TaskStudy attribute) received_series_uid (common.types.TaskStudy attribute) region (common.types.S3Target attribute) register_dicom() (in module bookkeeper) register_series() (in module bookkeeper) register_task() (in module bookkeeper) remove_series() (in module routing.route_series) remove_study_folder() (in module routing.route_studies) RepeatedTimer (class in common.helper) replace_tags() (in module common.rule_evaluation) requires_root (common.types.Module attribute) resources (common.types.Module attribute) retain_input_images (common.types.TaskProcessing attribute) retention (common.types.Config attribute) retries (common.types.TaskDispatch attribute) retry_delay (common.types.Config attribute) retry_max (common.types.Config attribute) ROUTE (common.constants.mercure_actions attribute) route_error_files() (in module routing.route_series) route_studies() (in module routing.route_studies)

router module router_scan_interval (common.types.Config attribute) routing.generate_taskfile module routing.route_series module routing.route_studies module RsyncTarget (class in common.types) Rule (class in common.types) RULE (common.constants.mercure_rule attribute) rule (common.types.Rule attribute) (common.types.UnsetRule attribute) RULES (common.constants.mercure_config attribute) rules (common.types.Config attribute) rules_delete_post() (in module webinterface.rules) rules_edit() (in module webinterface.rules) rules_edit_post() (in module webinterface.rules) rules_test() (in module webinterface.rules) rules_test_completionseries() (in module webinterface.rules) run_on_complete (common.types.RsyncTarget attribute) run_processor() (in module processor) run_router() (in module router) run_until_complete() (common.helper.AsyncTimer method) RUNNING (common.constants.mercure_names attribute)

S

S3Target (class in common.types) save_config() (in module common.config) save_module() (in module webinterface.modules) save_users() (in module webinterface.users) search_folder() (in module processor) secret_access_key (common.types.S3Target attribute) self_test() (in module webgui) self_test_cleanup() (in module webgui) self_test_notification() (in module webgui) send_email() (in module common.notification) send_email_helper() (in module common.notification) send_event() (in module common.monitor) send_process_logs() (in module common.monitor) send_processor_output() (in module common.monitor) send_register_series() (in module common.monitor) send_register_task() (in module common.monitor) send_task_event() (in module common.monitor) send_to_graphite() (in module common.helper) send_to_influxdb() (in module common.helper) send_update_task() (in module common.monitor) send_webgui_event() (in module common.monitor) send_webhook() (in module common.notification) sender_address (common.types.TaskInfo attribute) SENDLOG (common.constants.mercure_names attribute) SEPARATOR (common.constants.mercure_defs attribute) SERIES (common.constants.mercure_options attribute) series_complete_trigger (common.types.Config attribute) series_uid (common.types.TaskDispatch attribute) server_error() (in module bookkeeper) (in module webgui) ServerErrorResponse (class in webinterface.modules) SessionAuthBackend (class in webgui) set_api_key() (in module common.monitor) set_queues_status() (in module webinterface.queue) settings (common.types.Module attribute) (common.types.TaskProcessing attribute) settings_edit() (in module webgui) setup() (in module common.notification) SftpTarget (class in common.types) show_first_log() (in module webgui)

show_jobs_fail() (in module webinterface.queue) show_jobs_processing() (in module webinterface.queue) show_jobs_routing() (in module webinterface.queue) show_jobs_studies() (in module webinterface.queue) show_log() (in module webgui) show_modules() (in module webinterface.modules) show_queues() (in module webinterface.queue) show_queues_status() (in module webinterface.queue) show_rules() (in module webinterface.rules) show_targets() (in module webinterface.targets) show_users() (in module webinterface.users) shutdown() (in module bookkeeper) (in module webgui) start() (common.helper.AsyncTimer method) (common.helper.RepeatedTimer method) startup() (in module bookkeeper) (in module webgui) stop() (common.helper.AsyncTimer method) (common.helper.RepeatedTimer method) store_processor_output() (in module bookkeeper) stow_url_prefix (common.types.DicomWebTarget attribute) STUDIES (common.constants.mercure_folders attribute) studies_folder (common.types.Config attribute) STUDY (common.constants.mercure_options attribute) (common.constants.mercure_sections attribute) study (common.types.Task attribute) (common.types.TaskHasStudy attribute) study_complete_trigger (common.types.Config attribute) study_forcecomplete_trigger (common.types.Config attribute) STUDY_TRIGGER (common.constants.mercure_rule attribute) STUDY_TRIGGER_CONDITION (common.constants.mercure_rule attribute) study_trigger_condition (common.types.Rule attribute) STUDY_TRIGGER_CONDITION_RECEIVED_SERIES (common.constants.mercure_rule attribute) STUDY_TRIGGER_CONDITION_TIMEOUT (common.constants.mercure_rule attribute) study_trigger_series (common.types.Rule attribute) STUDY_UID (common.constants.mercure_study attribute) study_uid (common.types.TaskStudy attribute) SUCCESS (common.constants.mercure_folders attribute) success_folder (common.types.Config attribute) support_root_modules (common.types.Config attribute)

T

TAGS (common.constants.mercure_names attribute) tags (common.types.Rule attribute) Target (class in common.types) TARGET (common.constants.mercure_rule attribute) target (common.types.Rule attribute) target_name (common.types.TaskDispatch attribute) target_type (common.types.DicomTarget attribute) (common.types.DicomTLSTarget attribute) (common.types.DicomWebTarget attribute) (common.types.DummyTarget attribute) (common.types.FolderTarget attribute) (common.types.RsyncTarget attribute) (common.types.S3Target attribute) (common.types.SftpTarget attribute) (common.types.XnatTarget attribute) TARGETS (common.constants.mercure_config attribute) targets (common.types.Config attribute) targets_delete_post() (in module webinterface.targets) targets_edit() (in module webinterface.targets) targets_edit_post() (in module webinterface.targets) targets_test_post() (in module webinterface.targets) Task (class in common.types) Task.Config (class in common.types) task_event_payload() (in module common.monitor) task_process_logs() (in module common.monitor)

TaskDispatch (class in common.types) TASKFILE (common.constants.mercure_names attribute) TaskHasStudy (class in common.types) TaskInfo (class in common.types) TaskProcessing (class in common.types) TaskStudy (class in common.types) terminate_process() (in module cleaner) (in module dispatcher) (in module processor) (in module router) test_begin() (in module bookkeeper) test_completion_series() (in module common.rule_evaluation) test_end() (in module bookkeeper) test_endpoint() (in module bookkeeper) tls_cert (common.types.DicomTLSTarget attribute) tls_key (common.types.DicomTLSTarget attribute) TokenAuth (class in bookkeeper) trigger_notification() (in module process.process_series) trigger_notification_for_rule() (in module common.notification) trigger_serieslevel_notification() (in module routing.route_series) trigger_studylevel_notification() (in module routing.route_studies) trigger_terminate() (in module common.helper) TRIGGERED_RULES (common.constants.mercure_info attribute) triggered_rules (common.types.TaskInfo attribute) TRUE (common.constants.mercure_options attribute)

U

UID (common.constants.mercure_info attribute) uid (common.types.TaskInfo attribute) UID_TYPE (common.constants.mercure_info attribute) uid_type (common.types.TaskInfo attribute) UnsetRule (class in common.types) update_study_task() (in module routing.generate_taskfile) update_task() (in module bookkeeper) URGENT (common.constants.mercure_options attribute)

url (common.types.DicomWebTarget attribute) User (class in webinterface.users) user (common.types.RsyncTarget attribute) (common.types.SftpTarget attribute) (common.types.XnatTarget attribute) users_delete_post() (in module webinterface.users) users_edit() (in module webinterface.users) users_edit_post() (in module webinterface.users)

V

validate() (common.types.Target class method)

verify() (bookkeeper.TokenAuth method) VERSION (common.constants.mercure_defs attribute)

W

wado_url_prefix (common.types.DicomWebTarget attribute) webgui module webhook_certificate_location (common.types.Config attribute) webinterface.common module webinterface.modules module webinterface.queue module

webinterface.rules module webinterface.services module webinterface.targets module webinterface.users module write_configfile() (in module common.config)

X

XnatTarget (class in common.types)